YeaZ

A convolutional neural network for segmenting yeast cell images

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Modality:

Phase contrast neural network based on 8217 cells.
Bright-field network based on 3841 cells x 6 exposure times.

Min. distance between cell interior seeds:

Smaller values allow smaller cells to be detected but increase the chances of oversegmentation. Default: 5 pixels (0.5 μm for 0.1 μm / pixel system).

Reference: Dietler et al., Nature Communications (2020)
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